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D. R. Bickel, Z. Montazeri, P.-C. Hsieh, M. Beatty, S. J. Lawit and N. J. Bate, Gene network reconstruction from transcriptional dynamics under kinetic model uncertainty: A case for the second derivative. Bioinformatics. 2009 Feb 13. Full paper
Anna Jezierski, Albert Swedani, Lisheng Wang., Development of Hematopoietic and Endothelial Cells from Human Embryonic Stem Cells: Lessons from the Studies using Mouse as a Model. TheScientificWorldJOURNAL. 2007 7 1950-1964. Full paper
Smith JC, Duchesne MA, Tozzi P, Ethier M, Figeys D., A differential phosphoproteomic analysis of retinoic acid-treated P19 cells. Journal of Proteome Research. (2007) 6(8):3174-3186. Abstract
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Rob M Ewing, Peter Chu, Fred Elisma, Hongyan Li, Paul Taylor, Shane Climie, Linda McBroom-Cerajewski, Mark D Robinson, Liam O’Connor, Michael Li, Rod Taylor, Moyez Dharsee, Yuen Ho, Adrian Heilbut, Lynda Moore, Shudong Zhang, Olga Ornatsky, Yury V Bukhman, Martin Ethier, Yinglun Sheng, Julian Vasilescu, Mohamed Abu-Farha, Jean-Philippe Lambert, Henry S Duewel, Ian I Stewart, Bonnie Kuehl, Kelly Hogue, Karen Colwill, Katharine Gladwish, Brenda Muskat, Robert Kinach, Sally-Lin Adams, Michael F Moran, Gregg B Morin, Thodoros Topaloglou, and Daniel Figeys., Large-scale mapping of human protein–protein interactions by mass spectrometry. Mol Syst Biol. 2007;3:89. Epub 2007 Mar 13. Abstract / Full paper
Vasilescu J, Zweitzig DR, Denis NJ, Smith JC, Ethier M, Haines DS, Figeys D., The proteomic reactor facilitates the analysis of affinity-purified proteins by mass spectrometry: application for identifying ubiquitinated proteins in human cells. J Proteome Res. 2007 Jan;6(1):298-305. Abstract / Full paper
Hou W, Ethier M, Smith JC, Sheng Y, Figeys D., Multiplexed Proteomic Reactor for the Processing of Proteomic Samples. Anal Chem. 2007 Jan 1;79(1):39-44. Abstract / Full paper
Lee JW, Figeys D, Vasilescu J., Biomarker assay translation from discovery to clinical studies in cancer drug development: quantification of emerging protein biomarkers. Adv Cancer Res. 2007;96:269-98. Abstract
Ethier M, Hou W, Duewel HS, Figeys D., The proteomic reactor: a microfluidic device for processing minute amounts of protein prior to mass spectrometry analysis. J Proteome Res. 2006 Oct;5(10):2754-9. Abstract / Full paper
Smith JC, Figeys D., Proteomics technology in systems biology. Mol Biosyst. 2006 Aug;2(8):364-70. Epub 2006 Jun 27.Abstract
Vasilescu J, Figeys D., Mapping protein-protein interactions by mass spectrometry. Curr Opin Biotechnol. 2006 Aug;17(4):394-9. Epub 2006 Jul 5. Abstract
Ethier M, Figeys D, Perreault H., N-glycosylation analysis using the StrOligo algorithm. Methods Mol Biol. 2006;328:187-97. Abstract
Ethier M, Figeys D., Strategy to design improved proteomic experiments based on statistical analyses of the chemical properties of identified peptides. J Proteome Res. 2005 Nov-Dec;4(6):2201-6. Abstract / Full paper
Vasilescu J, Smith JC, Ethier M, Figeys D., Proteomic analysis of ubiquitinated proteins from human MCF-7 breast cancer cells by immunoaffinity purification and mass spectrometry. J Proteome Res. 2005 Nov-Dec;4(6):2192-200. Abstract / Full paper
Lambert JP, Ethier M, Smith JC, Figeys D., Proteomics: from gel based to gel free. Anal Chem. 2005 Jun 15;77(12):3771-87. Abstract / Full paper
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Systematic yeast synthetic lethal and synthetic dosage lethal screens identify genes required for chromosome segregation (501 KB PDF)
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